Today, Dr. Patrick Schloss, Professor in the Department of Microbiology and Immunology in the School of Medicine at the University of Michigan, joins the #QualityQuorum to discuss how the human microbiome is studied, possible pitfalls in such data analysis, and what tools he and his coworkers have developed to lead toward repeatable, hypothesis-driven science.
Host: Mark O. Martin
Guest: Patrick Schloss
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Links for this episode
- An overview of how the gut microbiome is analyzed.
- One of the articles discussed by Dr. Schloss exploring reproducibility in microbiome studies: “Identifying and Overcoming Threats to Reproducibility, Replicability, Robustness, and Generalizability in Microbiome Research.”
- Another article discussed by Dr. Schloss, regarding the link between the microbiome and obesity: “Looking for a Signal in the Noise: Revisiting Obesity and the Microbiome.”
- An article from Dr. Schloss’ research team that explores a link between the human microbiome and a type of colorectal cancer.
- A link to the MOTHUR project, used to analyze microbiome data.
- A link to a video by Dr. Schloss: “Understanding Disease Through the Lens of the Microbiome.”
- Dr. Schloss’ YouTube channel about data analysis.
- Dr. Schloss’ research group website.
- Dr. Schloss’ faculty website.
Intro music is by Reber Clark
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